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CERID Bibliography

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Author Title Type [ Year(Asc)]
Filters: Keyword is Evolution, Molecular  [Clear All Filters]
2012
Patel MR, Loo Y-M, Horner SM, Gale M, Malik HS. Convergent evolution of escape from hepaciviral antagonism in primates. PLoS Biol. 2012 ;10(3):e1001282.
Giacani L, Chattopadhyay S, Centurion-Lara A, Jeffrey BM, Le HT, Molini BJ, Lukehart SA, Sokurenko EV, Rockey DD. Footprint of positive selection in Treponema pallidum subsp. pallidum genome sequences suggests adaptive microevolution of the syphilis pathogen. PLoS Negl Trop Dis. 2012 ;6(6):e1698.
2010
Yuan HJ, Jain M, Snow KK, Gale M, Lee WM. Evolution of hepatitis C virus NS5A region in breakthrough patients during pegylated interferon and ribavirin therapy*. J Viral Hepat. 2010 ;17(3):208-16.
2009
Dark MJ, Herndon DR, Kappmeyer LS, Gonzales MP, Nordeen E, Palmer GH, Knowles DP, Brayton KA. Conservation in the face of diversity: multistrain analysis of an intracellular bacterium. BMC Genomics. 2009 ;10:16.
Jain MK, Yuan H-J, Adams-Huet B, Reeck A, Shelton J, Attar N, Zhang S, Neumann AU, Carney DS, Gale M, et al. Pegylated interferon and ribavirin promote early evolution of nonstructural 5A protein in individuals with hepatitis C who demonstrate a response to treatment. J Infect Dis. 2009 ;200(6):866-76.
2008
Stinear TP, Seemann T, Harrison PF, Jenkin GA, Davies JK, Johnson PDR, Abdellah Z, Arrowsmith C, Chillingworth T, Churcher C, et al. Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis. Genome Res. 2008 ;18(5):729-41.
Mulligan CJ, Norris SJ, Lukehart SA. Molecular studies in Treponema pallidum evolution: toward clarity?. PLoS Negl Trop Dis. 2008 ;2(1):e184.
2007
Rolland M, Brander C, Nickle DC, Herbeck JT, Gottlieb GS, Campbell MS, Maust BS, Mullins JI. HIV-1 over time: fitness loss or robustness gain?. Nat Rev Microbiol. 2007 ;5(9):C1.
2006
Herbeck JT, Nickle DC, Learn GH, Gottlieb GS, Curlin ME, Heath L, Mullins JI. Human immunodeficiency virus type 1 env evolves toward ancestral states upon transmission to a new host. J Virol. 2006 ;80(4):1637-44.
Gray RR, Mulligan CJ, Molini BJ, Sun ES, Giacani L, Godornes C, Kitchen A, Lukehart SA, Centurion-Lara A. Molecular evolution of the tprC, D, I, K, G, and J genes in the pathogenic genus Treponema. Mol Biol Evol. 2006 ;23(11):2220-33.
2005
Andersen-Nissen E, Smith KD, Strobe KL, Barrett SLRassouli, Cookson BT, Logan SM, Aderem A. Evasion of Toll-like receptor 5 by flagellated bacteria. Proc Natl Acad Sci U S A. 2005 ;102(26):9247-52.
Burton M, Rose TM, Faergeman NJ, Knudsen J. Evolution of the acyl-CoA binding protein (ACBP). Biochem J. 2005 ;392(Pt 2):299-307.
Roach JC, Glusman G, Rowen L, Kaur A, Purcell MK, Smith KD, Hood LE, Aderem A. The evolution of vertebrate Toll-like receptors. Proc Natl Acad Sci U S A. 2005 ;102(27):9577-82.
2003
Rose TM, Ryan JT, Schultz ER, Raden BW, Tsai C-C. Analysis of 4.3 kilobases of divergent locus B of macaque retroperitoneal fibromatosis-associated herpesvirus reveals a close similarity in gene sequence and genome organization to Kaposi's sarcoma-associated herpesvirus. J Virol. 2003 ;77(9):5084-97.
Nickle DC, Jensen MA, Gottlieb GS, Shriner D, Learn GH, Rodrigo AG, Mullins JI. Consensus and ancestral state HIV vaccines. Science. 2003 ;299(5612):1515-8; author reply 1515-8.
2002
Rurangirwa FR, Brayton KA, McGuire TC, Knowles DP, Palmer GH. Conservation of the unique rickettsial rRNA gene arrangement in Anaplasma. Int J Syst Evol Microbiol. 2002 ;52(Pt 4):1405-9.
2001
Belshan M, Baccam P, Oaks JL, Sponseller BA, Murphy SC, Cornette J, Carpenter S. Genetic and biological variation in equine infectious anemia virus Rev correlates with variable stages of clinical disease in an experimentally infected pony. Virology. 2001 ;279(1):185-200.
Gottlieb GS, Mullins JI. Re: Follow-up study of intrahost HIV type 2 variability reveals discontinuous evolution of C2V3 sequences. AIDS Res Hum Retroviruses. 2001 ;17(16):1563-5, 1567.
2000
Schultz ER, Rankin GW, Blanc MP, Raden BW, Tsai CC, Rose TM. Characterization of two divergent lineages of macaque rhadinoviruses related to Kaposi's sarcoma-associated herpesvirus. J Virol. 2000 ;74(10):4919-28.
1998
Rose TM, Schultz ER, Henikoff JG, Pietrokovski S, McCallum CM, Henikoff S. Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences. Nucleic Acids Res. 1998 ;26(7):1628-35.
Suarez CE, Palmer GH, Hötzel I, McElwain TF. Structure, sequence, and transcriptional analysis of the Babesia bovis rap-1 multigene locus. Mol Biochem Parasitol. 1998 ;93(2):215-24.
1997
Centurion-Lara A, Arroll T, Castillo R, Shaffer JM, Castro C, Van Voorhis WC, Lukehart SA. Conservation of the 15-kilodalton lipoprotein among Treponema pallidum subspecies and strains and other pathogenic treponemes: genetic and antigenic analyses. Infect Immun. 1997 ;65(4):1440-4.