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Prediction of protein crystallization outcome using a hybrid method.

TitlePrediction of protein crystallization outcome using a hybrid method.
Publication TypeJournal Article
Year of Publication2010
AuthorsZucker, FH, Stewart, C, Delarosa, J, Kim, J, Zhang, L, Xiao, L, Ross, J, Napuli, AJ, Mueller, N, Castaneda, LJ, Nakazawa Hewitt, SR, Arakaki, TL, Larson, ET, Subramanian, E, Verlinde, CLMJ, Fan, E, Buckner, FS, Van Voorhis, WC, Merritt, EA, Hol, WGJ
JournalJ Struct Biol
Volume171
Issue1
Pagination64-73
Date Published2010 Jul
ISSN1095-8657
KeywordsCrystallization, Crystallography, X-Ray, Data Interpretation, Statistical, Models, Molecular, Proteins, Sequence Analysis, Protein
Abstract

The great power of protein crystallography to reveal biological structure is often limited by the tremendous effort required to produce suitable crystals. A hybrid crystal growth predictive model is presented that combines both experimental and sequence-derived data from target proteins, including novel variables derived from physico-chemical characterization such as R(30), the ratio between a protein's DSF intensity at 30°C and at T(m). This hybrid model is shown to be more powerful than sequence-based prediction alone - and more likely to be useful for prioritizing and directing the efforts of structural genomics and individual structural biology laboratories.

DOI10.1016/j.jsb.2010.03.016
Alternate JournalJ. Struct. Biol.
PubMed ID20347992